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create-subjects-visits - Generate the list all subjects and visits of a given dataset

A TSV file with two columns (participant_id and session_id) containing the list of visits for each subject can be created as follows:

clinica iotools create-subjects-visits INPUT_DIRECTORY OUTPUT_TSV

where:

  • INPUT_DIRECTORY: input folder, which can be a BIDS compliant dataset or a CAPS ;
  • OUTPUT_TSV: output TSV file containing the subjects with their sessions.

Here is an example of the file generated by this tool:

participant_id   session_id
sub-01           ses-M000
sub-02           ses-M024
sub-03           ses-M024
...

Note

The format of the participant ID and the session ID follows the BIDS standard.

Example

clinica iotools create-subjects-visits /home/ADNI_BIDS/ adni_participants.tsv

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